Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015931964.1_cds_XP_016478601.1_70225
CDS Infomation

[gene=LOC107799971] [db_xref=GeneID:107799971] [protein=uncharacterized protein LOC107799971] [protein_id=XP_016478601.1] [location=join(5339..5870,5988..6095,6318..6753,7213..7291,7379..8173)] [gbkey=CDS]
Sequence

ATGACAAGAGAAACAGCTAAAAAGATGAGGTGGCACAAGGAGGGAAATGTTGATGATGGT
GTCTTGCGACATCCATCTGACTCAATAACATGGAAATCCTTTGATGCACGACATCCCACC
TTTTCAGCTGAGTTAAGAAATATTCGATTAGGTTTGGCAAGTGACGGGTTCCAACCTTAT
GGGAACATGAGTTCTAATCATAGCATTTGGCCAGTCCTACTAGCTACGTATAACTTGCCA
CCATGGGATTGCATGAAAAATCCATATTTCATGATGACGCTTCTTATTCCAGGCCCCAAG
TGTCCAGGCAATGATATCAATGTGTATTTACAACCAATGATTGAAGAGTTGAAAGAATTA
TGGGATGGGGTGGAGACTTATGATGCACTCTCAAAATCTAATTTTCTGATGCGTGTGGCT
ATCATGTGGACGATCAATGACTTTCCTGCATATGGACTTTCAGGATGGTCAACCAATGGC
AAGCTTGCATACCCTTGTTGCCATAAAGATACACAATCGACTTCCTTGTATAGTGATGAA
GCACTTGTGCAATTACAAGCTTTGGGTAATATGAGTTTTGGTAAAGGACAAAAGAGAAAG
CGTGATGTTTATAGCAATGCTTACAATTGGAAGAAGAAAACATGCTATGCATTGTCCGCG
GAAGAGAAGCTGAAGGTATGCAGTTTCTTAGCTAATCTGAAGGTTCCTGATGCATTTTCC
TCAAACATTTCAAGGTGTGTCAACGTACAGGAGAAAAATATACATGGATTGAAATGTCAC
GATCATCATGTATTGTTGCAAGACATTTTTCCAGTAGCTATACATGGTTTGCTACCCAAG
GAAGTGTGTGATCCAATTATAGTCTTAGGAAAGGTTTTCAAGAATATATACTCTAAGTGC
TTGACGATTGAAGATCTTGATATCCTAGAGGTAGAAATTCCGGTTATTTTGACCAAACTT
CAACTTGTTTTCCCTCCGGTTTTCTTTGATGTCATGGTTCATTTGCCAATTCACTTTCCA
AGTGAGGCAAAGCTTGGTGGACCAGCTCAATATCGTAATATGTATCCTATTGAGAGGGAA
TATACAAGAGAGATTGAAAGCCAAAGTTCAATGAGAGCTCATAAAAATGGGTTTCTTGAT
TGGTTTCGCGCACGTATATTTGTACTATCTGCACAAGGACGCGCAAATGATGAGCTCATA
AGCTTAGCCGTCGGTCCTGCACCATTAGTACATCGATATTCAACATTTGTGGTGAATGGA
TTTAGATTCGATACAAAAGAGCTTGCATTGAGAAATAAAATGCAGAATAGTGGTGTTCTT
GTGAGAGGAGATGATTCAGACTTTAAAAAGGAGTATTATGGTGTATTAGAGGATATTTAT
GAGTTATCTTATTTAGGAAACAGAAAAGTTTACTTATTCAATAGTCATTGGTGGGATGTG
GCTCGCTTAGGAAGAGGATATAAGATTGACAAATATGGCTTCACAAGTGTGAATACTCGG
TGTGCCTTGAATACAAATGAGCCATGTGTGTTGGCATCTCAGTCAGAACAAGTCTTTTAC
TTAGACGACATGGTCGATAATGATTGGCTTGTTGTTGTGAAGACAAATCCTCGTGACCTT
TTCAAAATGCCTGATAATGATGATAATTGTCTAGATATTGAAGATGAAGAATTACTGAAT
GAAGAAGTTTATCATCAAGAGAAAGCTGAATTTAATACTTTGTGTACCAATGACGAAGAA
AATATTGTTGAGGTGTCTCTACATAGGGATAATGTTGAACCACAAAGTATTAACTACGAT
CATGCAAGTACGCAAGCTCAAAACAATGTGCATAATGAGGAAGATGATTTCATTAATGAC
AATCATCTAGAAATATCAGAGAGTGAAGATAGTGAAGAAGAGTTATTTGATAATGATGAT
GATGGGGAGGACACCGATACATCCTCTTGA

Peptide Sequence

PEP ID

XP_016478601.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107799971 [Nicotiana tabacum]
Sequence

MTRETAKKMRWHKEGNVDDGVLRHPSDSITWKSFDARHPTFSAELRNIRLGLASDGFQPY
GNMSSNHSIWPVLLATYNLPPWDCMKNPYFMMTLLIPGPKCPGNDINVYLQPMIEELKEL
WDGVETYDALSKSNFLMRVAIMWTINDFPAYGLSGWSTNGKLAYPCCHKDTQSTSLYSDE
ALVQLQALGNMSFGKGQKRKRDVYSNAYNWKKKTCYALSAEEKLKVCSFLANLKVPDAFS
SNISRCVNVQEKNIHGLKCHDHHVLLQDIFPVAIHGLLPKEVCDPIIVLGKVFKNIYSKC
LTIEDLDILEVEIPVILTKLQLVFPPVFFDVMVHLPIHFPSEAKLGGPAQYRNMYPIERE
YTREIESQSSMRAHKNGFLDWFRARIFVLSAQGRANDELISLAVGPAPLVHRYSTFVVNG
FRFDTKELALRNKMQNSGVLVRGDDSDFKKEYYGVLEDIYELSYLGNRKVYLFNSHWWDV
ARLGRGYKIDKYGFTSVNTRCALNTNEPCVLASQSEQVFYLDDMVDNDWLVVVKTNPRDL
FKMPDNDDNCLDIEDEELLNEEVYHQEKAEFNTLCTNDEENIVEVSLHRDNVEPQSINYD
HASTQAQNNVHNEEDDFINDNHLEISESEDSEEELFDNDDDGEDTDTSS

Transcript Sequence

Gene sequence data has not been registered.